ISAnsp7

  • Family IS4
  • Group IS10
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
NC_011145 ND Anaeromyxobacter sp.
Anaeromyxobacter sp. K
DNA section
IS Length : 1579 bp

Ends


IR Length : 13/16

IRL : CTGCTGAGCTCGGAAGTCTATCTCCGATGGCGTTCGGCCCCTGACTGATC
IRR : CTGCTGAGCCCAAGAACCTCCCGCACGTCCGGGCGCCGCTGCCAACAGAC

Insertion site


Left flankDirect repeatRight flankDR Length
CCGCACGTTCAAGCCCAAGCTCCGATCCGAAGAAAGT0

DNA sequence

CTGCTGAGCTCGGAAGTCTATCTCCGATGGCGTTCGGCCCCTGACTGATCCCCTCATCTGCGAGGGGCAAGTTCTTGAAATCCGGGATCGAGGAGATCAC
GCTGCGGCCTCGTGAGCGACCAACCTCTCGACCGCGACCGGATCACGAAGCTCGTCTCCACCATCTTCGCCGAAGACCTGCACGCCAAGCGTGTGGCGTC
GCTGGCGGGAGCCGCGGTCGGTGTCCTGGAGGGCGCCGCGCTGGGCATCCACGCCATCGGAAATTCGCTCGCAGTTGCCGAGGGGCTCAAGTCGAAGCAC
GCGGTCAAGCAGGTGGACCGGATGCTGAGCAACGAGGGCATCCCGGTGTGGAGGCTCTTCGGGAGTTGGGTTCCCTGCGTCGTCGGCGACCGGCTGGAGA
TCGTCGTGGCGCTCGACTGGACCGACTTCGACGAGGACGACCAATCGACCATCGCGCTGTCGATGATCACCAGTCACGGTCGGGCCACGCCGCTGCTCTG
GAAGACGGTGATGAAGTCGGAGCTGAAGGGATGGCGGAACGAGCACGAGGACGTGCTCCTCGAGCGATTTCGCGAGGTGCTGCCCGAGGGCGTGAAGGTC
ACTGTCCTCGCAGACCGCGGCTTCGGCGACCAAGCTCTCTACGAACTGCTCAAGGACCAGCTCGGCTTCGGCTTCATCGTGCGCTTCCGTGGCGTGGTGA
AGGTGACCAGCGCCGAAGGCGAGACCAGGCCGGCCAAGGACTGGGTCCCGAGCAACGGACGCACGCTGCGCCTTCGTAGTGCCAGGGTCACGAAGTCCAG
GCGGGAGATCGGCGCCGTCGTTTGCGTGAAGGCCAAGGGCATGAAGGAAGCGTGGCACCTCGCCACGAGCCACGGCGACAAACCCGGCTCCGAGATCGTG
GCGCTCTACGCCAGGCGCTTCACCATCGAGGAGAGCTTCCGCGATCAGAAGAACCTTCGGTTCGGGATGGGCCTCTCCGAGACCCGCATCGCCGACCCAG
CGCGGCGAGACCGCCTGCTCCTCGTCAGCGCGGTCGCAATCGCGCTCCTCACGATCCTCGGCGCCGCAGGCGAGGCGCTCGGGCTGGACAAGTGGCTCAA
AACCAACACCGTCAAGCGCCGCACCATCTCGCTCCTGCGCCAGGGGATGATGCACTATGCGGCCCTCCCCAAGATGAAGCTCGACATGCTCGAGCCCCTC
ATGGCGAAGTTCGGCGAGATGCTCCGCGCCCAGCGCGTCTTCCGCGAGGTCTTCGGCCTCATATGAGGGGATGGCTCAGCCCAAGGGCAGGAAGAAGAGG
TATCGCGGCGCCGAACACATCCAGCGCAAAGCTTCCCGCATTGCCCCATGAAGGATTTGCTGCAAGCACCACCAGACTAGCACCTGCCGCGACAAAGTCG
CCCGCGCCCGGAATAACTGCGCAAACATACCAATTCTCTGGGGTCGATGCCTTTATGCGACGATCACTTCTCGCGGTCGGCTCGGTCGACGATGCGGCCC
TTCTCGAGCACGAATAGTCGCACACGCCTGTCTGTTGGCAGCGGCGCCCGGACGTGCGGGAGGTTCTTGGGCTCAGCAG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1155 bp384 aa1121266+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MSDQPLDRDRITKLVSTIFAEDLHAKRVASLAGAAVGVLEGAALGIHAIGNSLAVAEGLKSKHAVKQVDRMLSNEGIPVWRLFGSWVPCVVGDRLEIVVA
LDWTDFDEDDQSTIALSMITSHGRATPLLWKTVMKSELKGWRNEHEDVLLERFREVLPEGVKVTVLADRGFGDQALYELLKDQLGFGFIVRFRGVVKVTS
AEGETRPAKDWVPSNGRTLRLRSARVTKSRREIGAVVCVKAKGMKEAWHLATSHGDKPGSEIVALYARRFTIEESFRDQKNLRFGMGLSETRIADPARRD
RLLLVSAVAIALLTILGAAGEALGLDKWLKTNTVKRRTISLLRQGMMHYAALPKMKLDMLEPLMAKFGEMLRAQRVFREVFGLI

 

Blast result :
Comments
ISAnsp7 is 46% aa similar to ISVsa5.
References
1] ISfinder annotation (2009)
2] Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Saunders,E., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Kyrpides,N.,Ovchinnikiva,G. and Beliaev,A. (2008) Direct submission GenBank