ISAar14

  • Family ISL3
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Arthrobacter arilaitensis
Arthrobacter arilaitensis RE117
DNA section
IS Length : 1416 bp

Ends


IR Length : 22/24

IRL : GGCTCTTCAAGTTTTAGCGTGGTGAGCCCGAAAAATAAGTAAGGCCCGCA
IRR : GGCTCTTCGATTTTAAGCGTGGTGCAGGATGCTCAGCACGGCCGGAGGCC

Insertion site


Left flankDirect repeatRight flankDR Length
TCCTTAATCCCATAAATCACGCCCAGCT8
TCAGCACGCAGGTAAATCCGAGTTCCAG8

DNA sequence

GGCTCTTCAAGTTTTAGCGTGGTGAGCCCGAAAAATAAGTAAGGCCCGCAGTCCTCTGCGAAAATGGATGTTGTCTAGACAAACCATCAGCAAGGAACTA
CGAGCCGTGTTTAAGGATACCGGTGGAAACGACGCTGCGTCGATTCTTCTCAACCTCACTGACTACCGCGTCATCGACGCAACCCAAGAACCAGCCGGAC
GACAAGTCCTTATCGAGCCCAAAGCCACAGAGGCAGCCTGTCCAACTTGTGGGGTGATCACCACCCGCATCCACGCCAGACCAGTGCACCGGGTCAAAGA
CCTCCCAACCGGTGGCAACGACATTAAGGTCCTGGTGCGCAAACGCCGGATGGCCTGCCAAGAGACCGCCTGCGAACGCCGCTCGTTCGTGCAAACCACC
GAACAGCTACCGTTGAGGGCCCGGATCACCACCAGGCTCTCTCAAAAGCTCGTGGACGAGATGAGCTGCGAACTGCGAGCCGTGTCCAGGGTCGCTTCTG
CGTACCAAGTTTCCTGGCCAACCGTGATGGCACGGCTGAACTTTGAAGGTGAGCTCGCCGGTGACATTGACCGGATGTTCATCGGCAGGCTCGGTATTGA
TGAGCACCGTTTTCGTAAGGTCCGCTACGCCCGAGGTAGCAGCGGGAAAGTAGTCAGGATTGAGCCGTGGTCCATAGTCTTCACTGATCTGGATACTGGG
AAGATCCTCGATATCGTGGACGGACGGCGAGGTGCTGCGGTGAAGAAGTGGTTGAAGTCCCGGCCACGGTACTGGCGTCAACGAGTGCAGTACGTGGCCA
TTGATATGTCTGCTGAGTTCCGAAAAGCGGTGCGGGAGAACCTGCCCAAGGCAAAGATCAGCGTGGACCATTTTCACGTCATCGCGCGCGCGAATCTCAT
GATCACCCAGGTGCGCCGGCGCCGTTCCCATGAAGTCCATGAACGCCGAGGCAGAGTGGCTGATCCGGCCTACAAGTATCGGAAGCTATTGACCTGCAAT
TTGGAGAACTTGTCGATCAAGCAAGTTGAACGGCTGAAACTGATCCTTGAAGCAGATCCTGAGCTGGGCGTGATTTATGGGATTAAGGAACACGTGCGGG
AGCTGTTGAAAACCAGGGATATCCATGATTTTCAATCGAGGTGGGCGGTGCTGGAGAAATCGGTGAAGGCAACGAAAATGGTGGAAGCGAAGTCGTTGTT
CCGGACGCTGACTGCGTGGAGGCGCGAGTTGCTGGTGTTCATTCGTACGCGGTTGACGAATGCTCGGAGCGAGGCGGCGAACCTGACGGCGAAGAACTTG
AAACGGATCGGTCGGGGTTATCGGAATCATGGTCATTACCGGGTCAGGATATTGTTATACACGGCGGGCCTCCGGCCGTGCTGAGCATCCTGCACCACGC
TTAAAATCGAAGAGCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1278 bp425 aa1071384+No
ORF function : Transposase
Chemistry : Unknow

ORF sequence :

VFKDTGGNDAASILLNLTDYRVIDATQEPAGRQVLIEPKATEAACPTCGVITTRIHARPVHRVKDLPTGGNDIKVLVRKRRMACQETACERRSFVQTTEQ
LPLRARITTRLSQKLVDEMSCELRAVSRVASAYQVSWPTVMARLNFEGELAGDIDRMFIGRLGIDEHRFRKVRYARGSSGKVVRIEPWSIVFTDLDTGKI
LDIVDGRRGAAVKKWLKSRPRYWRQRVQYVAIDMSAEFRKAVRENLPKAKISVDHFHVIARANLMITQVRRRRSHEVHERRGRVADPAYKYRKLLTCNLE
NLSIKQVERLKLILEADPELGVIYGIKEHVRELLKTRDIHDFQSRWAVLEKSVKATKMVEAKSLFRTLTAWRRELLVFIRTRLTNARSEAANLTAKNLKR
IGRGYRNHGHYRVRILLYTAGLRPC

 

Blast result :
Comments
ISAar14 is 97% aa similar to ISAar13.
References
1] ISfinder annotation (2009).