ISAba48

  • Family IS701
  • Group ISAba11
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
NZ_CP023035 ND Acinetobacter baumannii
Acinetobacter baumannii 5845 plasmid pAba5845a
DNA section
IS Length : 1158 bp

Ends


IR Length : 20/25

IRL : TAGGACTTACGCATTAACTTGCAAATTCTTACAGAAAGGTAGAGACTAGG
IRR : TAGGACTTACGCATAAAAGTAAAAAAATAATGCACTATAGCCCAGAAAAT

Insertion site


Left flankDirect repeatRight flankDR Length
AATCCCCTTTAAAAGGTCACTTTTTTAT4

DNA sequence

TAGGACTTACGCATTAACTTGCAAATTCTTACAGAAAGGTAGAGACTAGGATGTAGCCTACAATTATAAGATATTGTAATTAAATGAATAAAGTATCAAA
TGGTTTAGATTTTCGTCAGGACTATTGTCAGTTTCTGATCGTGAGCCAAAAAAACTTCACTCAAACCTATTTTGCCGAACATACCAAAAGCTATACTCAT
GACCAGATCAACCGCTATTTGAAGTCTGATCACATCAGCTCTGCTGATATTTGGACAGAAGCAAAAGCTCATATTATCCCGAGTAATAAAGGCTATTTAT
TATTTGATGATACTGTTATTGATAAAAACTACTCTACCAAAATTGAAATGGTTCGTCGCCAGTACAGCGGTAATGCAGGCAGAGTCATCAAGGGAATAGG
TGTTGTTACCTGTGTGTATGTGAATCCAGAAATAGATCAATATTGGATAATTGATAAACGTTTTTATGATATAGATACGGACAATAAGACTAAATTACAA
CATGTTAAAGATATGTTTAATGACACGATTGATCATAAAAAGCTGGCATTTACAACACTATTAATGGATTCGTGGTATGCGGTCAAATGGCTGATGTTAT
TGATAGAAAGTCGAGGGATTATTTATTATTGCCCGATTAAAAGTAATAGAAATGTCAATAAAATAAGTAATTTAGAGATTAACTATCAACGAGTTGACAG
CCTGACATGGACAGATGAACAACATCAGTATGGGCATAGCGTCCATTTACGCGGTTTTCCCAAAGGTCATTCATTACAGGTTTACTGTTTACCGTTCTCT
ACCGAACGTACAGATTATATTGTGACGAATGCAACAACGACTCATACACTTGATGAGATCAAAACAATCTGTGCAGTTCGCTGGCGTATTGAGCAGGTGC
ATCGGGAGTTAAAACAAACGACAGGTATAGAACGTTGCCAGTGTCGCAAGGGTCAAAGTCAACGAAATCATATAGCTTGTTGTATATTGGTGTGGCATCG
TTTGATCGCCTTAGCGAGAAAATGGAAAACGACGATTTATAAGTTAAAGCAAGGCTTACTCAGTTCTTATATGCGAGAACAACTCAGAAAGCCTGATATT
GTGATGCTATTTTCTGGGCTATAGTGCATTATTTTTTTACTTTTATGCGTAAGTCCTA
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1041 bp346 aa841124+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MNKVSNGLDFRQDYCQFLIVSQKNFTQTYFAEHTKSYTHDQINRYLKSDHISSADIWTEAKAHIIPSNKGYLLFDDTVIDKNYSTKIEMVRRQYSGNAGR
VIKGIGVVTCVYVNPEIDQYWIIDKRFYDIDTDNKTKLQHVKDMFNDTIDHKKLAFTTLLMDSWYAVKWLMLLIESRGIIYYCPIKSNRNVNKISNLEIN
YQRVDSLTWTDEQHQYGHSVHLRGFPKGHSLQVYCLPFSTERTDYIVTNATTTHTLDEIKTICAVRWRIEQVHRELKQTTGIERCQCRKGQSQRNHIACC
ILVWHRLIALARKWKTTIYKLKQGLLSSYMREQLRKPDIVMLFSGL

 

Blast result :
Comments
ISAba48 is 65% aa similar to ISPlag1.
References
1] Patricia Siguier (2019) Direct submission.